Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC007322.4-201ENST00000509611 723 ntBASIC19.68■□□□□ 0.74
LRIT2A6NDA9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 AL137784.2-201ENST00000607332 1000 ntBASIC19.68■□□□□ 0.74
LRIT2A6NDA9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 CNN2P6-201ENST00000439038 900 ntBASIC19.67■□□□□ 0.74
LRIT2A6NDA9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 AL591742.1-201ENST00000604433 565 ntBASIC19.67■□□□□ 0.74
LRIT2A6NDA9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT2A6NDA9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 AC004911.1-201ENST00000416316 871 ntBASIC19.66■□□□□ 0.74
LRIT2A6NDA9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIT2A6NDA9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT2A6NDA9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRIT2A6NDA9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRIT2A6NDA9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
LRIT2A6NDA9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 PKD1P6-201ENST00000343738 4769 ntBASIC19.64■□□□□ 0.73
LRIT2A6NDA9 AC007322.3-201ENST00000426526 701 ntBASIC19.64■□□□□ 0.73
LRIT2A6NDA9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 CDV3P1-201ENST00000471403 739 ntBASIC19.64■□□□□ 0.73
LRIT2A6NDA9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 AL162412.1-201ENST00000567129 965 ntBASIC19.64■□□□□ 0.73
LRIT2A6NDA9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 AC080038.1-201ENST00000611274 1154 ntBASIC19.64■□□□□ 0.73
LRIT2A6NDA9 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT2A6NDA9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.63■□□□□ 0.73
LRIT2A6NDA9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 AC231657.2-201ENST00000624556 255 ntBASIC19.63■□□□□ 0.73
LRIT2A6NDA9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms