Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 LINC01006-201ENST00000333319 2292 ntBASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 LINC01521-201ENST00000504184 1943 ntBASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TCRBV5S1A1TA0A578 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
TCRBV5S1A1TA0A578 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.64■■□□□ 1.06
TCRBV5S1A1TA0A578 GABARAPL3-202ENST00000624044 1851 ntBASIC21.64■■□□□ 1.06
TCRBV5S1A1TA0A578 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.64■■□□□ 1.06
TCRBV5S1A1TA0A578 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TCRBV5S1A1TA0A578 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 AL121603.2-201ENST00000557373 2117 ntBASIC21.64■■□□□ 1.05
TCRBV5S1A1TA0A578 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 AC092667.1-201ENST00000434301 2586 ntBASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 FP700111.2-201ENST00000619190 1892 ntBASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBV5S1A1TA0A578 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 AC006015.1-201ENST00000429970 570 ntBASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 AL162430.1-201ENST00000480705 870 ntBASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 AC010536.3-201ENST00000620306 533 ntBASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TCRBV5S1A1TA0A578 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.61■■□□□ 1.05
TCRBV5S1A1TA0A578 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV5S1A1TA0A578 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV5S1A1TA0A578 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TCRBV5S1A1TA0A578 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TCRBV5S1A1TA0A578 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
TCRBV5S1A1TA0A578 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms