Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC196A0A1B0GTZ2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 AC006128.1-201ENST00000624704 1661 ntBASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 CDV3P1-201ENST00000471403 739 ntBASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 DUX4L16-201ENST00000555130 1264 ntBASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 AL591742.1-201ENST00000604433 565 ntBASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC196A0A1B0GTZ2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 AL162412.1-201ENST00000567129 965 ntBASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 AC092437.1-201ENST00000624794 1048 ntBASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC196A0A1B0GTZ2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 AC007322.3-201ENST00000426526 701 ntBASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 AL137784.2-201ENST00000607332 1000 ntBASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC196A0A1B0GTZ2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 IKBKGP1-201ENST00000612193 1073 ntBASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC196A0A1B0GTZ2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 AC231657.2-201ENST00000624556 255 ntBASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC196A0A1B0GTZ2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms