Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 AC020763.4-201ENST00000623414 4170 ntBASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 SERBP1P1-201ENST00000396021 1160 ntBASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 AP005435.1-201ENST00000529293 1178 ntBASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 AL035685.1-201ENST00000636663 812 ntBASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV13-1A0A0B4J241 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 DUX4L19-201ENST00000557448 1267 ntBASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 AL138724.1-201ENST00000606771 1088 ntBASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 PLK5-205ENST00000642079 1969 ntBASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-1A0A0B4J241 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 AC073314.1-201ENST00000568729 2216 ntBASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SLC47A1P1-202ENST00000449666 945 ntBASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV13-1A0A0B4J241 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 GABARAPL3-202ENST00000624044 1851 ntBASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 GUSBP5-201ENST00000418136 578 ntBASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms