Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAV13-2A0A0B4J235 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 AC007225.1-201ENST00000566331 1836 ntBASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 MIR639-201ENST00000384974 98 ntBASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 PKD1P1-201ENST00000458669 6805 ntBASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 AC121338.2-201ENST00000622535 1744 ntBASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
TRAV13-2A0A0B4J235 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 AC139795.1-202ENST00000500444 432 ntBASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms