Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV9-2A0A087WT02 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 AL139246.5-201ENST00000606645 996 ntBASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 OXCT2P1-201ENST00000447263 1535 ntBASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 AC009102.2-201ENST00000606772 1639 ntBASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 AP000974.1-201ENST00000623909 2387 ntBASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-2A0A087WT02 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 SYT6-210ENST00000641643 1587 ntBASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-2A0A087WT02 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 AC073314.1-201ENST00000568729 2216 ntBASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms