Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 SLC25A44-202ENST00000423538 3662 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 CRTAM-203ENST00000533709 1929 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AC106028.3-201ENST00000562894 1736 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 GHR-212ENST00000620156 4529 ntTSL 5 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 NFYC-211ENST00000427410 1379 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AL021707.2-203ENST00000444381 1325 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 TP53TG3C-201ENST00000360260 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 MIR345-201ENST00000362114 98 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 RN7SKP291-201ENST00000362961 327 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 OPN5-203ENST00000393699 1142 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 KRTAP12-3-201ENST00000397907 410 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 SMARCE1P5-201ENST00000412207 1225 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 HNRNPA1P14-201ENST00000440352 935 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 TUBBP2-201ENST00000454403 411 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 COTL1P2-201ENST00000455360 352 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 AC073089.1-201ENST00000457546 214 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 SCARNA7-201ENST00000458797 330 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 SERBP1P6-201ENST00000507707 932 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 AC008667.1-201ENST00000515296 568 ntTSL 4 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 IGHV3-33-2-201ENST00000517703 346 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 MTFR1L-215ENST00000524618 1217 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 ST13P10-201ENST00000526466 1082 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 LINC00609-201ENST00000546508 583 ntTSL 3 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 RRN3P1-204ENST00000551901 1157 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 AL137191.1-201ENST00000554921 814 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 LINC00564-201ENST00000567258 1119 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 TP53TG3-208ENST00000569420 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 TP53TG3D-207ENST00000569631 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 TP53TG3B-205ENST00000569741 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 ANAPC11-205ENST00000571570 581 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AC004585.1-201ENST00000578280 1014 ntTSL 5 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 LINC01841-202ENST00000588438 523 ntTSL 3 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 TP53TG3E-201ENST00000611321 1181 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 NDUFC2-KCTD14-203ENST00000612612 530 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AC011468.5-201ENST00000614138 748 ntBASIC8.92□□□□□ -0.98
SNX18Q96RF0 AL513327.1-204ENST00000630229 870 ntTSL 5 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 DMD-206ENST00000361471 2224 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SNX18Q96RF0 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.92□□□□□ -0.98
SNX18Q96RF0 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 UGT2A1-201ENST00000286604 1698 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ICA1-209ENST00000422063 1539 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AL160191.3-201ENST00000619152 2203 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ARL17A-201ENST00000329240 543 ntAPPRIS ALT2 TSL 4 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ACYP1-202ENST00000357971 650 ntTSL 3 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 PARP1-201ENST00000366790 570 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 FRG2FP-203ENST00000422555 567 ntTSL 4 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 Z99716.1-201ENST00000424613 515 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC000081.1-201ENST00000433141 297 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 PNLIPP1-201ENST00000439233 675 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms