Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AP000892.3-201ENST00000624094 5326 ntBASIC10.37□□□□□ -0.75
LMO3Q8TAP4 FO538757.2-201ENST00000624431 570 ntBASIC10.37□□□□□ -0.75
LMO3Q8TAP4 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC10.37□□□□□ -0.75
LMO3Q8TAP4 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
LMO3Q8TAP4 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LMO3Q8TAP4 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
LMO3Q8TAP4 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LMO3Q8TAP4 YME1L1-209ENST00000613434 4127 ntTSL 2 BASIC10.37□□□□□ -0.75
LMO3Q8TAP4 PDE4DIPP1-201ENST00000420737 1641 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 PNLIPRP1-201ENST00000358834 1497 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC092132.2-201ENST00000611227 2744 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 SMAD2-205ENST00000586040 1971 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 LINC02504-201ENST00000512241 4949 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 RNU1-67P-201ENST00000384446 164 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 EIF4E2-206ENST00000409495 1014 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AL590559.1-201ENST00000414338 374 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 LINC01890-201ENST00000415448 1017 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AL671883.1-201ENST00000421191 306 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC114808.1-201ENST00000437132 432 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC004534.1-201ENST00000462678 489 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 TUBB4BP4-201ENST00000527023 304 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 LINC01912-201ENST00000581844 496 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC010615.4-201ENST00000600810 472 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CXCL17-202ENST00000601181 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AL121890.4-201ENST00000616569 609 ntTSL 3 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 DPP6-216ENST00000619756 1109 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC126915.3-201ENST00000620111 208 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CU633904.2-201ENST00000624595 879 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 RHOXF1P3-201ENST00000635058 502 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 FAM240B-201ENST00000637493 1160 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AC091939.1-202ENST00000642039 795 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AL356961.1-201ENST00000567967 1923 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 UTS2-203ENST00000377516 1601 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 AP004782.1-201ENST00000623990 3433 ntBASIC10.36□□□□□ -0.75
LMO3Q8TAP4 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 ZBBX-203ENST00000392766 3250 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC10.36□□□□□ -0.75
LMO3Q8TAP4 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC009055.2-201ENST00000567058 1337 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 OR5BA1P-202ENST00000641215 5464 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AL590426.1-201ENST00000440811 2285 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 SIRPG-201ENST00000216927 831 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 GH2-201ENST00000332800 1138 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 RAET1E-201ENST00000357183 958 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 SNORA71C-201ENST00000364642 134 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms