Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC10.23□□□□□ -0.77
SLC1A1P43005 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 NLRP10-201ENST00000328600 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC10.23□□□□□ -0.77
SLC1A1P43005 MAPK10-386ENST00000642038 2354 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC10.23□□□□□ -0.77
SLC1A1P43005 AC025031.5-201ENST00000623851 2523 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 AC130365.1-201ENST00000530524 1553 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 TNFSF11-204ENST00000405262 2135 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 SNRPD2-202ENST00000391932 615 ntTSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 SLC25A6P6-201ENST00000404247 778 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 AL137222.1-201ENST00000407765 1162 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC10.22□□□□□ -0.77
SLC1A1P43005 RPL10P11-201ENST00000414541 616 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 AC010998.1-201ENST00000414774 943 ntTSL 3 BASIC10.22□□□□□ -0.77
SLC1A1P43005 AL031667.2-201ENST00000423903 323 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 AC012456.2-201ENST00000431500 561 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 HNRNPA1P47-201ENST00000453073 931 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 IGKV1-37-201ENST00000465170 398 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SLC1A1P43005 AP000926.2-201ENST00000469983 358 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 RPL34P17-201ENST00000472160 347 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC10.22□□□□□ -0.77
SLC1A1P43005 RPL29-206ENST00000481629 880 ntTSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 IGKV1D-37-201ENST00000509129 353 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SLC1A1P43005 OR1X5P-201ENST00000510464 894 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 AF250324.1-202ENST00000511785 979 ntTSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 SNORA68.4-201ENST00000516649 129 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 AC025161.1-201ENST00000552481 591 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC10.22□□□□□ -0.77
SLC1A1P43005 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 AC109495.1-201ENST00000568026 551 ntTSL 4 BASIC10.22□□□□□ -0.77
SLC1A1P43005 AC139099.1-204ENST00000575205 425 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 MRPL35-204ENST00000605125 833 ntTSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 AC013400.1-201ENST00000607190 545 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 SOX2-OT-249ENST00000628810 618 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 CD36-208ENST00000433696 1985 ntTSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 CLDN18-202ENST00000343735 3434 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 PTPN20-202ENST00000374339 1388 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 CHEK2-207ENST00000403642 1359 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SLC1A1P43005 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SLC1A1P43005 RPE-201ENST00000354506 3165 ntTSL 2 BASIC10.22□□□□□ -0.77
SLC1A1P43005 MAPK10-274ENST00000641120 2456 ntBASIC10.22□□□□□ -0.77
SLC1A1P43005 CNBD2-205ENST00000538900 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 C15orf32-202ENST00000624458 1749 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC10.21□□□□□ -0.77
SLC1A1P43005 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC10.21□□□□□ -0.77
SLC1A1P43005 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC10.21□□□□□ -0.77
SLC1A1P43005 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SLC1A1P43005 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC10.21□□□□□ -0.77
SLC1A1P43005 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC10.21□□□□□ -0.77
SLC1A1P43005 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 PRG3-201ENST00000287143 869 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 AURKC-201ENST00000302804 1247 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
SLC1A1P43005 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC10.21□□□□□ -0.77
SLC1A1P43005 RN7SKP249-201ENST00000365490 355 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC10.21□□□□□ -0.77
SLC1A1P43005 SNORA48B-201ENST00000390912 135 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 RN7SKP7-201ENST00000410540 285 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 RN7SL683P-201ENST00000460552 270 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC10.21□□□□□ -0.77
SLC1A1P43005 OR5AC4P-201ENST00000509306 919 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 AC112240.1-201ENST00000511007 394 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 AC008434.1-201ENST00000514201 549 ntTSL 3 BASIC10.21□□□□□ -0.77
SLC1A1P43005 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
SLC1A1P43005 OR4D7P-201ENST00000534196 942 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 PEX11A-203ENST00000559170 905 ntTSL 2 BASIC10.21□□□□□ -0.77
SLC1A1P43005 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC10.21□□□□□ -0.77
SLC1A1P43005 RN7SL577P-201ENST00000584532 303 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 AC079230.1-201ENST00000602428 1143 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 FAM205C-202ENST00000603592 468 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
SLC1A1P43005 NAPGP1-201ENST00000603818 719 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 AL359198.1-201ENST00000610263 571 ntTSL 3 BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 763.6 ms