Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.52■■□□□ 1.68
TNFRSF11AQ9Y6Q6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 RARRES2P4-201ENST00000514074 484 ntBASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AL137060.1-201ENST00000618151 2648 ntBASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.51■■□□□ 1.67
TNFRSF11AQ9Y6Q6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AL355802.2-201ENST00000402069 882 ntBASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AL049796.1-201ENST00000565336 1766 ntBASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AC142086.2-201ENST00000569753 217 ntBASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AL162412.1-201ENST00000567129 965 ntBASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AC010980.2-201ENST00000587099 1412 ntBASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 AL355472.2-201ENST00000422958 438 ntBASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 OR10C1-204ENST00000622521 1039 ntBASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TNFRSF11AQ9Y6Q6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TNFRSF11AQ9Y6Q6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
TNFRSF11AQ9Y6Q6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
TNFRSF11AQ9Y6Q6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.45■■□□□ 1.66
TNFRSF11AQ9Y6Q6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TNFRSF11AQ9Y6Q6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 MIPEPP3-201ENST00000412105 444 ntBASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TNFRSF11AQ9Y6Q6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms