Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 AC105020.6-201ENST00000621523 1217 ntBASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.83■■□□□ 1.08
HCFC2Q9Y5Z7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
HCFC2Q9Y5Z7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.83■■□□□ 1.08
HCFC2Q9Y5Z7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC2Q9Y5Z7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC2Q9Y5Z7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 REXO1L12P-201ENST00000622156 912 ntBASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.8■■□□□ 1.08
HCFC2Q9Y5Z7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 AC211429.1-201ENST00000415277 523 ntBASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
HCFC2Q9Y5Z7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC2Q9Y5Z7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HCFC2Q9Y5Z7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC2Q9Y5Z7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC2Q9Y5Z7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.77■■□□□ 1.08
HCFC2Q9Y5Z7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC2Q9Y5Z7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HCFC2Q9Y5Z7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
HCFC2Q9Y5Z7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.77■■□□□ 1.07
HCFC2Q9Y5Z7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms