Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 AC091799.1-201ENST00000422823 811 ntBASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 AC073648.6-201ENST00000641589 218 ntBASIC20.58■□□□□ 0.89
SNX11Q9Y5W9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.58■□□□□ 0.88
SNX11Q9Y5W9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SNX11Q9Y5W9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX11Q9Y5W9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX11Q9Y5W9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
SNX11Q9Y5W9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SNX11Q9Y5W9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 AL596275.1-201ENST00000423464 877 ntBASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 RPS2P4-201ENST00000476944 856 ntBASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 FAM21FP-204ENST00000608637 956 ntBASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SNX11Q9Y5W9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 UNC93B4-201ENST00000505679 747 ntBASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX11Q9Y5W9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 CDV3P1-201ENST00000471403 739 ntBASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 CYP2T3P-201ENST00000601990 817 ntBASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 AC092053.2-201ENST00000640557 1818 ntBASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNX11Q9Y5W9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 AC245052.3-201ENST00000450182 901 ntBASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms