Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 FAM99A-202ENST00000538190 1989 ntBASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 AC010980.2-201ENST00000587099 1412 ntBASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSSC4Q9Y5U2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 AC097658.1-201ENST00000475555 843 ntBASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 AC010542.4-201ENST00000563151 1910 ntBASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TSSC4Q9Y5U2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 RNA5SP413-201ENST00000516373 109 ntBASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 FAM21FP-204ENST00000608637 956 ntBASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSSC4Q9Y5U2 AC026471.6-201ENST00000622954 1905 ntBASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSSC4Q9Y5U2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TSSC4Q9Y5U2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 LSM12P1-201ENST00000411836 588 ntBASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 AC091799.1-201ENST00000422823 811 ntBASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.14■□□□□ 0.17
TSSC4Q9Y5U2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms