Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 GUSBP6-202ENST00000438529 1198 ntBASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 RARRES2P4-201ENST00000514074 484 ntBASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 FAM21FP-204ENST00000608637 956 ntBASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN16Q9Y5I7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 AC006970.2-201ENST00000450065 779 ntBASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 AC116050.2-201ENST00000612102 1779 ntBASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN16Q9Y5I7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN16Q9Y5I7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 AC093787.1-201ENST00000450396 207 ntBASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 OR10C1-204ENST00000622521 1039 ntBASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN16Q9Y5I7 AC011484.1-201ENST00000377652 1995 ntBASIC19.33■□□□□ 0.69
CLDN16Q9Y5I7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
CLDN16Q9Y5I7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN16Q9Y5I7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 AC007322.3-201ENST00000426526 701 ntBASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 AC083906.2-201ENST00000511578 360 ntBASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 AL137060.1-201ENST00000618151 2648 ntBASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN16Q9Y5I7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 AL512625.2-201ENST00000417533 625 ntBASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 CDV3P1-201ENST00000471403 739 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms