Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHB13Q9Y5F0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 AC010536.3-201ENST00000620306 533 ntBASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB13Q9Y5F0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHB13Q9Y5F0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 TERF1P5-201ENST00000477545 1207 ntBASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.83■■□□□ 1.25
PCDHB13Q9Y5F0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.83■■□□□ 1.24
PCDHB13Q9Y5F0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHB13Q9Y5F0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHB13Q9Y5F0 AC121338.2-201ENST00000622535 1744 ntBASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 MFSD11-216ENST00000590393 1141 ntBASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB13Q9Y5F0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 AC011767.1-201ENST00000617410 1153 ntBASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 BID-214ENST00000617586 542 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDHB13Q9Y5F0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB13Q9Y5F0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
PCDHB13Q9Y5F0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB13Q9Y5F0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHB13Q9Y5F0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms