Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PKP3Q9Y446 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PKP3Q9Y446 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.79■□□□□ 0.92
PKP3Q9Y446 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 AC006015.1-201ENST00000429970 570 ntBASIC20.78■□□□□ 0.92
PKP3Q9Y446 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 RARRES2P11-201ENST00000635158 484 ntBASIC20.78■□□□□ 0.92
PKP3Q9Y446 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP3Q9Y446 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP3Q9Y446 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PKP3Q9Y446 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 AC243732.1-201ENST00000612648 864 ntBASIC20.77■□□□□ 0.92
PKP3Q9Y446 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP3Q9Y446 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.77■□□□□ 0.92
PKP3Q9Y446 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.77■□□□□ 0.91
PKP3Q9Y446 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PKP3Q9Y446 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP3Q9Y446 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP3Q9Y446 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PKP3Q9Y446 RBM17P2-201ENST00000616397 1405 ntBASIC20.76■□□□□ 0.91
PKP3Q9Y446 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.76■□□□□ 0.91
PKP3Q9Y446 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 BID-214ENST00000617586 542 ntTSL 5 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 AC010536.3-201ENST00000620306 533 ntBASIC20.75■□□□□ 0.91
PKP3Q9Y446 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PKP3Q9Y446 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP3Q9Y446 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
PKP3Q9Y446 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.74■□□□□ 0.91
PKP3Q9Y446 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms