Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KCNIP3Q9Y2W7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KCNIP3Q9Y2W7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.29■□□□□ 0.36
KCNIP3Q9Y2W7 PCDHAC2-203ENST00000615316 3011 ntBASIC17.29■□□□□ 0.36
KCNIP3Q9Y2W7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KCNIP3Q9Y2W7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KCNIP3Q9Y2W7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 AC090340.1-201ENST00000620778 4980 ntBASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KCNIP3Q9Y2W7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 AC020907.5-201ENST00000624372 1936 ntBASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KCNIP3Q9Y2W7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNIP3Q9Y2W7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNIP3Q9Y2W7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNIP3Q9Y2W7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
KCNIP3Q9Y2W7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNIP3Q9Y2W7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
KCNIP3Q9Y2W7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 AC006455.2-201ENST00000429931 906 ntBASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 TSPY9P-201ENST00000440215 945 ntBASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 TSPY11P-201ENST00000442607 1045 ntBASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 AC007225.1-201ENST00000566331 1836 ntBASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNIP3Q9Y2W7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 AC027702.1-201ENST00000563810 1770 ntBASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 MIR6724-1-201ENST00000616420 92 ntBASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 MIR6724-2-201ENST00000616483 92 ntBASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 MIR6724-4-201ENST00000617390 92 ntBASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 MIR6724-3-201ENST00000622482 92 ntBASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KCNIP3Q9Y2W7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms