Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CAPN11Q9UMQ6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CAPN11Q9UMQ6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CAPN11Q9UMQ6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CAPN11Q9UMQ6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.43■■□□□ 1.18
CAPN11Q9UMQ6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AP004607.4-201ENST00000530158 1459 ntBASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 PBX2P1-201ENST00000493219 1291 ntBASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AP001330.3-201ENST00000520123 633 ntBASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AC106739.1-201ENST00000617035 715 ntBASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CAPN11Q9UMQ6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CAPN11Q9UMQ6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 EDA-201ENST00000338901 1233 ntBASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 AC096631.2-201ENST00000436136 790 ntBASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.4■■□□□ 1.18
CAPN11Q9UMQ6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CAPN11Q9UMQ6 RASA4CP-201ENST00000424092 1398 ntBASIC22.39■■□□□ 1.18
CAPN11Q9UMQ6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CAPN11Q9UMQ6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 AC012414.1-201ENST00000556676 535 ntBASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CAPN11Q9UMQ6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 AFG3L1P-217ENST00000557444 2447 ntBASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CAPN11Q9UMQ6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 AC131212.1-201ENST00000613771 668 ntBASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 PCDHAC2-203ENST00000615316 3011 ntBASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CAPN11Q9UMQ6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms