Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 AC009237.3-201ENST00000393279 1427 ntBASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NIPSNAP3AQ9UFN0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 AL391422.3-201ENST00000603791 2761 ntBASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.74■□□□□ 0.75
NIPSNAP3AQ9UFN0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 AC133561.4-201ENST00000566112 224 ntBASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.73■□□□□ 0.75
NIPSNAP3AQ9UFN0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 AL136116.3-201ENST00000402907 1138 ntBASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 AC233992.3-201ENST00000607491 485 ntBASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 AC027702.1-201ENST00000563810 1770 ntBASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 AC007225.1-201ENST00000566331 1836 ntBASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NIPSNAP3AQ9UFN0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.71■□□□□ 0.75
NIPSNAP3AQ9UFN0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 IGHV3-19-201ENST00000521488 291 ntBASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms