Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 AC135279.3-201ENST00000610945 1311 ntBASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF2Q9P2I0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 AC133561.4-201ENST00000566112 224 ntBASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.77■□□□□ 0.92
CPSF2Q9P2I0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPSF2Q9P2I0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.77■□□□□ 0.91
CPSF2Q9P2I0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.77■□□□□ 0.91
CPSF2Q9P2I0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 AC008764.7-201ENST00000593779 1081 ntBASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CPSF2Q9P2I0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 AC008406.3-201ENST00000620001 1374 ntBASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 IGHV3-19-201ENST00000521488 291 ntBASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CPSF2Q9P2I0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 AL020996.1-203ENST00000536896 2307 ntBASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF2Q9P2I0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms