Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AL121603.2-201ENST00000557373 2117 ntBASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AC231657.2-201ENST00000624556 255 ntBASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AC092437.1-201ENST00000624794 1048 ntBASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AC013268.1-206ENST00000638368 961 ntBASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 AC112229.1-201ENST00000639295 961 ntBASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SDHAF3Q9NRP4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SDHAF3Q9NRP4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.02■□□□□ 0.63
SDHAF3Q9NRP4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SDHAF3Q9NRP4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 AC080038.1-201ENST00000611274 1154 ntBASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAF3Q9NRP4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SDHAF3Q9NRP4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 RARRES2P11-201ENST00000635158 484 ntBASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAF3Q9NRP4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 AC007322.1-201ENST00000426983 750 ntBASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 CDV3P1-201ENST00000471403 739 ntBASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 DUX4L16-201ENST00000555130 1264 ntBASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAF3Q9NRP4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 AC007322.4-201ENST00000509611 723 ntBASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms