Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C12orf4Q9NQ89 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
C12orf4Q9NQ89 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C12orf4Q9NQ89 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 GUSBP5-201ENST00000418136 578 ntBASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C12orf4Q9NQ89 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 AC010525.1-201ENST00000585559 441 ntBASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 AL138724.1-201ENST00000606771 1088 ntBASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C12orf4Q9NQ89 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms