Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MKKSQ9NPJ1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MKKSQ9NPJ1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 AC105036.2-201ENST00000569468 176 ntBASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.62■□□□□ 0.73
MKKSQ9NPJ1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 SLC29A4P1-201ENST00000398760 971 ntBASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 TSPY6P-201ENST00000448518 926 ntBASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MKKSQ9NPJ1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 AC244015.2-201ENST00000616358 1861 ntBASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 AC091799.1-201ENST00000422823 811 ntBASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 CDV3P1-201ENST00000471403 739 ntBASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
MKKSQ9NPJ1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 AL512625.2-201ENST00000417533 625 ntBASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MKKSQ9NPJ1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
MKKSQ9NPJ1 AC007375.3-201ENST00000600936 2314 ntBASIC19.58■□□□□ 0.73
MKKSQ9NPJ1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MKKSQ9NPJ1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MKKSQ9NPJ1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MKKSQ9NPJ1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.58■□□□□ 0.72
MKKSQ9NPJ1 AL355802.2-201ENST00000402069 882 ntBASIC19.58■□□□□ 0.72
MKKSQ9NPJ1 GUSBP6-202ENST00000438529 1198 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms