Protein–RNA interactions for Protein: Q9NPI1

BRD7, Bromodomain-containing protein 7, humanhuman

Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7Q9NPI1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRD7Q9NPI1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 AL049796.1-201ENST00000565336 1766 ntBASIC18.47■□□□□ 0.55
BRD7Q9NPI1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 AC027682.1-201ENST00000562846 899 ntBASIC18.47■□□□□ 0.55
BRD7Q9NPI1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 AC106739.1-201ENST00000617035 715 ntBASIC18.47■□□□□ 0.55
BRD7Q9NPI1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 AC105233.4-201ENST00000642045 216 ntBASIC18.47■□□□□ 0.55
BRD7Q9NPI1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD7Q9NPI1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD7Q9NPI1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
BRD7Q9NPI1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
BRD7Q9NPI1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 AC110285.6-201ENST00000617652 491 ntBASIC18.45■□□□□ 0.54
BRD7Q9NPI1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD7Q9NPI1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 AP001330.3-201ENST00000520123 633 ntBASIC18.44■□□□□ 0.54
BRD7Q9NPI1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD7Q9NPI1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD7Q9NPI1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms