Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 AC104564.3-201ENST00000582367 638 ntBASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 AL162430.1-201ENST00000480705 870 ntBASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.08■□□□□ 0.81
CLK4Q9HAZ1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLK4Q9HAZ1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLK4Q9HAZ1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLK4Q9HAZ1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLK4Q9HAZ1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.08■□□□□ 0.8
CLK4Q9HAZ1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLK4Q9HAZ1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 KRT18P5-201ENST00000436075 1291 ntBASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLK4Q9HAZ1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 AC003102.1-202ENST00000563394 1796 ntBASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 AC138907.5-202ENST00000569484 235 ntBASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK4Q9HAZ1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
CLK4Q9HAZ1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms