Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
POLR1BQ9H9Y6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 MIPEPP3-201ENST00000412105 444 ntBASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 TERF1P5-201ENST00000477545 1207 ntBASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1BQ9H9Y6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 MKRN4P-201ENST00000444706 1521 ntBASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
POLR1BQ9H9Y6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1BQ9H9Y6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
POLR1BQ9H9Y6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
POLR1BQ9H9Y6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1BQ9H9Y6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 AC068338.2-201ENST00000563278 1430 ntBASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 CYP2T1P-201ENST00000432607 1285 ntBASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 AC079089.2-201ENST00000531211 1277 ntBASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1BQ9H9Y6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 OR10C1-204ENST00000622521 1039 ntBASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1BQ9H9Y6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms