Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 BX842568.3-201ENST00000418104 571 ntBASIC19.65■□□□□ 0.74
NANOGQ9H9S0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NANOGQ9H9S0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NANOGQ9H9S0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
NANOGQ9H9S0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.64■□□□□ 0.74
NANOGQ9H9S0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.64■□□□□ 0.74
NANOGQ9H9S0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NANOGQ9H9S0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 BX005040.4-201ENST00000637145 1518 ntBASIC19.64■□□□□ 0.73
NANOGQ9H9S0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NANOGQ9H9S0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NANOGQ9H9S0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NANOGQ9H9S0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 AC131281.2-201ENST00000520478 145 ntBASIC19.61■□□□□ 0.73
NANOGQ9H9S0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
NANOGQ9H9S0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.6■□□□□ 0.73
NANOGQ9H9S0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 AC233992.3-201ENST00000607491 485 ntBASIC19.6■□□□□ 0.73
NANOGQ9H9S0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms