Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC006970.2-201ENST00000450065 779 ntBASIC24.51■■□□□ 1.51
RNF41Q9H4P4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.51■■□□□ 1.51
RNF41Q9H4P4 AC116050.2-201ENST00000612102 1779 ntBASIC24.51■■□□□ 1.51
RNF41Q9H4P4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RNF41Q9H4P4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.5■■□□□ 1.51
RNF41Q9H4P4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 FAM21FP-204ENST00000608637 956 ntBASIC24.5■■□□□ 1.51
RNF41Q9H4P4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF41Q9H4P4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 AC007322.3-201ENST00000426526 701 ntBASIC24.49■■□□□ 1.51
RNF41Q9H4P4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 AC069236.1-201ENST00000604339 616 ntBASIC24.49■■□□□ 1.51
RNF41Q9H4P4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 AC008694.1-202ENST00000636953 945 ntBASIC24.49■■□□□ 1.51
RNF41Q9H4P4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF41Q9H4P4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.48■■□□□ 1.51
RNF41Q9H4P4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF41Q9H4P4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 AL050303.2-201ENST00000619798 666 ntBASIC24.47■■□□□ 1.51
RNF41Q9H4P4 OR10C1-204ENST00000622521 1039 ntBASIC24.47■■□□□ 1.51
RNF41Q9H4P4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF41Q9H4P4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 RARRES2P4-201ENST00000514074 484 ntBASIC24.46■■□□□ 1.51
RNF41Q9H4P4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 AC133552.2-202ENST00000575694 574 ntBASIC24.46■■□□□ 1.51
RNF41Q9H4P4 AC016405.3-201ENST00000607710 860 ntBASIC24.46■■□□□ 1.51
RNF41Q9H4P4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF41Q9H4P4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.45■■□□□ 1.51
RNF41Q9H4P4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF41Q9H4P4 AF106564.1-201ENST00000607058 2553 ntBASIC24.45■■□□□ 1.5
RNF41Q9H4P4 PKD1P6-201ENST00000343738 4769 ntBASIC24.45■■□□□ 1.5
RNF41Q9H4P4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 AC011484.1-201ENST00000377652 1995 ntBASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms