Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 SLC25A24-204ENST00000569674 2357 ntBASIC19.19■□□□□ 0.66
UBQLN3Q9H347 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 SLC7A5P1-201ENST00000568957 537 ntBASIC19.18■□□□□ 0.66
UBQLN3Q9H347 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 AC073130.3-201ENST00000624389 2278 ntBASIC19.18■□□□□ 0.66
UBQLN3Q9H347 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN3Q9H347 AL157384.1-201ENST00000445995 2473 ntBASIC19.17■□□□□ 0.66
UBQLN3Q9H347 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN3Q9H347 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN3Q9H347 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AL049796.1-201ENST00000565336 1766 ntBASIC19.15■□□□□ 0.66
UBQLN3Q9H347 POU5F1P4-201ENST00000413175 1085 ntBASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AC026185.1-201ENST00000445748 174 ntBASIC19.15■□□□□ 0.66
UBQLN3Q9H347 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 SLC7A5P2-201ENST00000553010 536 ntBASIC19.15■□□□□ 0.66
UBQLN3Q9H347 DUX4L16-201ENST00000555130 1264 ntBASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 AC008175.2-201ENST00000612840 297 ntBASIC19.15■□□□□ 0.66
UBQLN3Q9H347 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN3Q9H347 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN3Q9H347 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN3Q9H347 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms