Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.47■□□□□ 0.39
ALX4Q9H161 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.47■□□□□ 0.39
ALX4Q9H161 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.47■□□□□ 0.39
ALX4Q9H161 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.47■□□□□ 0.39
ALX4Q9H161 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ALX4Q9H161 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.47■□□□□ 0.39
ALX4Q9H161 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.47■□□□□ 0.39
ALX4Q9H161 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ALX4Q9H161 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ALX4Q9H161 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALX4Q9H161 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ALX4Q9H161 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.46■□□□□ 0.39
ALX4Q9H161 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ALX4Q9H161 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ALX4Q9H161 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ALX4Q9H161 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ALX4Q9H161 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ALX4Q9H161 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
ALX4Q9H161 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.45■□□□□ 0.38
ALX4Q9H161 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.45■□□□□ 0.38
ALX4Q9H161 AC098818.2-201ENST00000564925 2320 ntBASIC17.45■□□□□ 0.38
ALX4Q9H161 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.45■□□□□ 0.38
ALX4Q9H161 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.45■□□□□ 0.38
ALX4Q9H161 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
ALX4Q9H161 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.45■□□□□ 0.38
ALX4Q9H161 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALX4Q9H161 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.44■□□□□ 0.38
ALX4Q9H161 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
ALX4Q9H161 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ALX4Q9H161 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
ALX4Q9H161 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.44■□□□□ 0.38
ALX4Q9H161 AC096631.2-201ENST00000436136 790 ntBASIC17.44■□□□□ 0.38
ALX4Q9H161 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.44■□□□□ 0.38
ALX4Q9H161 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ALX4Q9H161 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ALX4Q9H161 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ALX4Q9H161 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALX4Q9H161 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
ALX4Q9H161 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ALX4Q9H161 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.43■□□□□ 0.38
ALX4Q9H161 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.43■□□□□ 0.38
ALX4Q9H161 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.43■□□□□ 0.38
ALX4Q9H161 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms