Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 AC061975.6-201ENST00000579045 1553 ntBASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM54Q9BYV2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L2-201ENST00000561772 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L6-201ENST00000626483 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L1-201ENST00000627662 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L8-201ENST00000629013 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L3-201ENST00000630187 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L7-201ENST00000630678 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 DUX4L5-201ENST00000630834 1275 ntBASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
TRIM54Q9BYV2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM54Q9BYV2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM54Q9BYV2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.39■□□□□ 0.86
TRIM54Q9BYV2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 AC010141.2-201ENST00000452426 721 ntBASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 AC104187.1-201ENST00000607510 612 ntBASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM54Q9BYV2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM54Q9BYV2 AL157384.1-201ENST00000445995 2473 ntBASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM54Q9BYV2 KRT16P2-201ENST00000414673 1423 ntBASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM54Q9BYV2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms