Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VRK1Q99986 AC055733.4-201ENST00000638462 1354 ntBASIC18.2■□□□□ 0.5
VRK1Q99986 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK1Q99986 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK1Q99986 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.2■□□□□ 0.5
VRK1Q99986 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.2■□□□□ 0.5
VRK1Q99986 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK1Q99986 AC011767.1-201ENST00000617410 1153 ntBASIC18.2■□□□□ 0.5
VRK1Q99986 AC073111.5-205ENST00000641717 521 ntBASIC18.2■□□□□ 0.5
VRK1Q99986 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK1Q99986 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK1Q99986 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK1Q99986 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK1Q99986 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.2■□□□□ 0.5
VRK1Q99986 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK1Q99986 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK1Q99986 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VRK1Q99986 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VRK1Q99986 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
VRK1Q99986 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK1Q99986 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VRK1Q99986 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.19■□□□□ 0.5
VRK1Q99986 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.19■□□□□ 0.5
VRK1Q99986 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VRK1Q99986 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK1Q99986 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.19■□□□□ 0.5
VRK1Q99986 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK1Q99986 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VRK1Q99986 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK1Q99986 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VRK1Q99986 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VRK1Q99986 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VRK1Q99986 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VRK1Q99986 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 ID1-201ENST00000376105 1233 ntBASIC18.18■□□□□ 0.5
VRK1Q99986 AC026185.1-201ENST00000445748 174 ntBASIC18.18■□□□□ 0.5
VRK1Q99986 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.18■□□□□ 0.5
VRK1Q99986 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.18■□□□□ 0.5
VRK1Q99986 AL157384.1-201ENST00000445995 2473 ntBASIC18.18■□□□□ 0.5
VRK1Q99986 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VRK1Q99986 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VRK1Q99986 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK1Q99986 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 LINC01521-201ENST00000504184 1943 ntBASIC18.17■□□□□ 0.5
VRK1Q99986 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
VRK1Q99986 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.17■□□□□ 0.5
VRK1Q99986 CDCA4P2-201ENST00000441182 718 ntBASIC18.17■□□□□ 0.5
VRK1Q99986 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
VRK1Q99986 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.17■□□□□ 0.5
VRK1Q99986 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 AP001160.3-201ENST00000601484 763 ntBASIC18.17■□□□□ 0.5
VRK1Q99986 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
VRK1Q99986 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
VRK1Q99986 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK1Q99986 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VRK1Q99986 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.16■□□□□ 0.5
VRK1Q99986 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
VRK1Q99986 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VRK1Q99986 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK1Q99986 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK1Q99986 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.16■□□□□ 0.5
VRK1Q99986 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK1Q99986 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK1Q99986 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VRK1Q99986 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms