Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS2Q99743 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS2Q99743 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
NPAS2Q99743 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
NPAS2Q99743 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.22■□□□□ 0.83
NPAS2Q99743 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 CCDC92B-201ENST00000575506 885 ntBASIC20.22■□□□□ 0.83
NPAS2Q99743 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS2Q99743 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 AC007952.6-201ENST00000573168 2673 ntBASIC20.22■□□□□ 0.83
NPAS2Q99743 AC003957.1-201ENST00000625108 2673 ntBASIC20.22■□□□□ 0.83
NPAS2Q99743 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NPAS2Q99743 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS2Q99743 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.22■□□□□ 0.83
NPAS2Q99743 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.21■□□□□ 0.83
NPAS2Q99743 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS2Q99743 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPAS2Q99743 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.21■□□□□ 0.83
NPAS2Q99743 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NPAS2Q99743 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.21■□□□□ 0.83
NPAS2Q99743 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 AC006128.1-201ENST00000624704 1661 ntBASIC20.21■□□□□ 0.83
NPAS2Q99743 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS2Q99743 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS2Q99743 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPAS2Q99743 PLK5-205ENST00000642079 1969 ntBASIC20.21■□□□□ 0.83
NPAS2Q99743 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS2Q99743 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.2■□□□□ 0.82
NPAS2Q99743 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS2Q99743 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAS2Q99743 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAS2Q99743 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.2■□□□□ 0.82
NPAS2Q99743 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS2Q99743 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS2Q99743 AC010141.3-201ENST00000456659 717 ntBASIC20.2■□□□□ 0.82
NPAS2Q99743 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAS2Q99743 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.2■□□□□ 0.82
NPAS2Q99743 AC087239.1-201ENST00000622671 572 ntBASIC20.2■□□□□ 0.82
NPAS2Q99743 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAS2Q99743 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS2Q99743 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAS2Q99743 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NPAS2Q99743 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAS2Q99743 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS2Q99743 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPAS2Q99743 KRT18P5-201ENST00000436075 1291 ntBASIC20.19■□□□□ 0.82
NPAS2Q99743 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAS2Q99743 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAS2Q99743 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 TERF1P2-201ENST00000583350 1212 ntBASIC20.19■□□□□ 0.82
NPAS2Q99743 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPAS2Q99743 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAS2Q99743 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NPAS2Q99743 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NPAS2Q99743 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS2Q99743 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAS2Q99743 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NPAS2Q99743 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NPAS2Q99743 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.18■□□□□ 0.82
NPAS2Q99743 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NPAS2Q99743 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.18■□□□□ 0.82
NPAS2Q99743 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.18■□□□□ 0.82
NPAS2Q99743 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 AFG3L1P-217ENST00000557444 2447 ntBASIC20.18■□□□□ 0.82
NPAS2Q99743 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
NPAS2Q99743 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NPAS2Q99743 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms