Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SPENQ96T58 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.85■□□□□ 0.61
SPENQ96T58 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.85■□□□□ 0.61
SPENQ96T58 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 AC107956.1-201ENST00000494359 873 ntBASIC18.85■□□□□ 0.61
SPENQ96T58 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.85■□□□□ 0.61
SPENQ96T58 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SPENQ96T58 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.84■□□□□ 0.61
SPENQ96T58 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SPENQ96T58 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.84■□□□□ 0.61
SPENQ96T58 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.84■□□□□ 0.61
SPENQ96T58 LSM12P1-201ENST00000411836 588 ntBASIC18.84■□□□□ 0.61
SPENQ96T58 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.84■□□□□ 0.61
SPENQ96T58 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.84■□□□□ 0.61
SPENQ96T58 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.84■□□□□ 0.61
SPENQ96T58 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPENQ96T58 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.84■□□□□ 0.61
SPENQ96T58 AC243732.1-201ENST00000612648 864 ntBASIC18.84■□□□□ 0.61
SPENQ96T58 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPENQ96T58 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPENQ96T58 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.83■□□□□ 0.61
SPENQ96T58 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SPENQ96T58 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SPENQ96T58 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPENQ96T58 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.83■□□□□ 0.61
SPENQ96T58 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPENQ96T58 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPENQ96T58 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.83■□□□□ 0.6
SPENQ96T58 AC145285.6-201ENST00000604632 637 ntBASIC18.83■□□□□ 0.6
SPENQ96T58 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.83■□□□□ 0.6
SPENQ96T58 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SPENQ96T58 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPENQ96T58 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.83■□□□□ 0.6
SPENQ96T58 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPENQ96T58 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SPENQ96T58 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SPENQ96T58 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPENQ96T58 AC012618.2-201ENST00000428058 849 ntBASIC18.82■□□□□ 0.6
SPENQ96T58 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SPENQ96T58 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.82■□□□□ 0.6
SPENQ96T58 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.82■□□□□ 0.6
SPENQ96T58 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.82■□□□□ 0.6
SPENQ96T58 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPENQ96T58 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.82■□□□□ 0.6
SPENQ96T58 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.82■□□□□ 0.6
SPENQ96T58 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPENQ96T58 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPENQ96T58 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPENQ96T58 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SPENQ96T58 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SPENQ96T58 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.81■□□□□ 0.6
SPENQ96T58 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.81■□□□□ 0.6
SPENQ96T58 AL355075.4-201ENST00000554988 638 ntBASIC18.81■□□□□ 0.6
SPENQ96T58 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.81■□□□□ 0.6
SPENQ96T58 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.81■□□□□ 0.6
SPENQ96T58 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.81■□□□□ 0.6
SPENQ96T58 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.81■□□□□ 0.6
SPENQ96T58 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.81■□□□□ 0.6
SPENQ96T58 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.81■□□□□ 0.6
SPENQ96T58 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.81■□□□□ 0.6
SPENQ96T58 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
SPENQ96T58 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPENQ96T58 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 POM121L13P-201ENST00000422362 380 ntBASIC18.8■□□□□ 0.6
SPENQ96T58 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPENQ96T58 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.8■□□□□ 0.6
SPENQ96T58 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SPENQ96T58 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.8■□□□□ 0.6
SPENQ96T58 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SPENQ96T58 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SPENQ96T58 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.8■□□□□ 0.6
SPENQ96T58 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.8■□□□□ 0.6
SPENQ96T58 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 AC105020.6-201ENST00000621523 1217 ntBASIC18.8■□□□□ 0.6
SPENQ96T58 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms