Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 AC121338.2-201ENST00000622535 1744 ntBASIC19.6■□□□□ 0.73
BBS4Q96RK4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BBS4Q96RK4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BBS4Q96RK4 KRT16P2-201ENST00000414673 1423 ntBASIC19.59■□□□□ 0.73
BBS4Q96RK4 AC004854.2-201ENST00000608450 1441 ntBASIC19.59■□□□□ 0.73
BBS4Q96RK4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
BBS4Q96RK4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BBS4Q96RK4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BBS4Q96RK4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BBS4Q96RK4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BBS4Q96RK4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BBS4Q96RK4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BBS4Q96RK4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BBS4Q96RK4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BBS4Q96RK4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.58■□□□□ 0.72
BBS4Q96RK4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
BBS4Q96RK4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.58■□□□□ 0.72
BBS4Q96RK4 AIRN-201ENST00000601203 4374 ntBASIC19.58■□□□□ 0.72
BBS4Q96RK4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.58■□□□□ 0.72
BBS4Q96RK4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BBS4Q96RK4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
BBS4Q96RK4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.57■□□□□ 0.72
BBS4Q96RK4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.57■□□□□ 0.72
BBS4Q96RK4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.57■□□□□ 0.72
BBS4Q96RK4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
BBS4Q96RK4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BBS4Q96RK4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 KRT19P1-201ENST00000405746 1186 ntBASIC19.56■□□□□ 0.72
BBS4Q96RK4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 AC245052.3-201ENST00000450182 901 ntBASIC19.56■□□□□ 0.72
BBS4Q96RK4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.56■□□□□ 0.72
BBS4Q96RK4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BBS4Q96RK4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BBS4Q96RK4 AC006128.1-201ENST00000624704 1661 ntBASIC19.56■□□□□ 0.72
BBS4Q96RK4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 PLK5-205ENST00000642079 1969 ntBASIC19.55■□□□□ 0.72
BBS4Q96RK4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms