Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 AC069236.1-201ENST00000604339 616 ntBASIC16.1■□□□□ 0.17
DUX3Q96PT4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.1■□□□□ 0.17
DUX3Q96PT4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUX3Q96PT4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 AC007322.4-201ENST00000509611 723 ntBASIC16.09■□□□□ 0.17
DUX3Q96PT4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DUX3Q96PT4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DUX3Q96PT4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DUX3Q96PT4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
DUX3Q96PT4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
DUX3Q96PT4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DUX3Q96PT4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
DUX3Q96PT4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 CD99P1-205ENST00000527459 561 ntBASIC16.08■□□□□ 0.16
DUX3Q96PT4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX3Q96PT4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DUX3Q96PT4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 AL591742.1-201ENST00000604433 565 ntBASIC16.07■□□□□ 0.16
DUX3Q96PT4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms