Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CMTM3Q96MX0 AC011484.1-201ENST00000377652 1995 ntBASIC17.8■□□□□ 0.44
CMTM3Q96MX0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 AL033527.3-201ENST00000566366 1196 ntBASIC17.8■□□□□ 0.44
CMTM3Q96MX0 MIR3181-201ENST00000578512 73 ntBASIC17.8■□□□□ 0.44
CMTM3Q96MX0 AC116562.4-201ENST00000641316 2276 ntBASIC17.8■□□□□ 0.44
CMTM3Q96MX0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMTM3Q96MX0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 AP005435.1-201ENST00000529293 1178 ntBASIC17.79■□□□□ 0.44
CMTM3Q96MX0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMTM3Q96MX0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 AC092720.2-201ENST00000602388 1665 ntBASIC17.78■□□□□ 0.44
CMTM3Q96MX0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.78■□□□□ 0.44
CMTM3Q96MX0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CMTM3Q96MX0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms