Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CALR3Q96L12 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CALR3Q96L12 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.9■■□□□ 1.1
CALR3Q96L12 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.9■■□□□ 1.1
CALR3Q96L12 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.9■■□□□ 1.1
CALR3Q96L12 POU5F1P4-201ENST00000413175 1085 ntBASIC21.9■■□□□ 1.1
CALR3Q96L12 AC091305.1-201ENST00000479476 895 ntBASIC21.9■■□□□ 1.1
CALR3Q96L12 AP001330.3-201ENST00000520123 633 ntBASIC21.9■■□□□ 1.1
CALR3Q96L12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.9■■□□□ 1.1
CALR3Q96L12 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.9■■□□□ 1.1
CALR3Q96L12 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CALR3Q96L12 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.89■■□□□ 1.09
CALR3Q96L12 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CALR3Q96L12 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.89■■□□□ 1.09
CALR3Q96L12 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.89■■□□□ 1.09
CALR3Q96L12 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.89■■□□□ 1.09
CALR3Q96L12 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
CALR3Q96L12 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.89■■□□□ 1.09
CALR3Q96L12 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CALR3Q96L12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.89■■□□□ 1.09
CALR3Q96L12 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.89■■□□□ 1.09
CALR3Q96L12 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.89■■□□□ 1.09
CALR3Q96L12 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CALR3Q96L12 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.88■■□□□ 1.09
CALR3Q96L12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CALR3Q96L12 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CALR3Q96L12 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.88■■□□□ 1.09
CALR3Q96L12 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CALR3Q96L12 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.88■■□□□ 1.09
CALR3Q96L12 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 AL354811.1-201ENST00000610286 706 ntBASIC21.88■■□□□ 1.09
CALR3Q96L12 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CALR3Q96L12 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.88■■□□□ 1.09
CALR3Q96L12 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.87■■□□□ 1.09
CALR3Q96L12 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 AC008406.3-201ENST00000620001 1374 ntBASIC21.87■■□□□ 1.09
CALR3Q96L12 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.87■■□□□ 1.09
CALR3Q96L12 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.87■■□□□ 1.09
CALR3Q96L12 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CALR3Q96L12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CALR3Q96L12 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 MIR939-201ENST00000401314 82 ntBASIC21.87■■□□□ 1.09
CALR3Q96L12 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.87■■□□□ 1.09
CALR3Q96L12 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.87■■□□□ 1.09
CALR3Q96L12 AC008175.2-201ENST00000612840 297 ntBASIC21.87■■□□□ 1.09
CALR3Q96L12 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.87■■□□□ 1.09
CALR3Q96L12 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 AC027702.1-201ENST00000563810 1770 ntBASIC21.87■■□□□ 1.09
CALR3Q96L12 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CALR3Q96L12 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.86■■□□□ 1.09
CALR3Q96L12 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CALR3Q96L12 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CALR3Q96L12 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 AC096631.2-201ENST00000436136 790 ntBASIC21.86■■□□□ 1.09
CALR3Q96L12 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CALR3Q96L12 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CALR3Q96L12 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CALR3Q96L12 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CALR3Q96L12 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.85■■□□□ 1.09
CALR3Q96L12 AC131212.1-201ENST00000613771 668 ntBASIC21.85■■□□□ 1.09
CALR3Q96L12 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CALR3Q96L12 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CALR3Q96L12 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.85■■□□□ 1.09
CALR3Q96L12 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms