Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDHR1Q96JP9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 AL355472.2-201ENST00000422958 438 ntBASIC23.31■■□□□ 1.32
CDHR1Q96JP9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDHR1Q96JP9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 KRT18P68-201ENST00000392293 1000 ntBASIC23.3■■□□□ 1.32
CDHR1Q96JP9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 EP400NL-214ENST00000641289 2402 ntBASIC23.3■■□□□ 1.32
CDHR1Q96JP9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.3■■□□□ 1.32
CDHR1Q96JP9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 KRT17P1-201ENST00000399211 1546 ntBASIC23.29■■□□□ 1.32
CDHR1Q96JP9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 ABHD17AP1-201ENST00000358206 933 ntBASIC23.29■■□□□ 1.32
CDHR1Q96JP9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 AC083880.1-201ENST00000608266 535 ntBASIC23.29■■□□□ 1.32
CDHR1Q96JP9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 CYP21A1P-202ENST00000354927 1481 ntBASIC23.29■■□□□ 1.32
CDHR1Q96JP9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDHR1Q96JP9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.28■■□□□ 1.32
CDHR1Q96JP9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDHR1Q96JP9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 FBXW4P1-201ENST00000426721 2239 ntBASIC23.27■■□□□ 1.32
CDHR1Q96JP9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.27■■□□□ 1.32
CDHR1Q96JP9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CDHR1Q96JP9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.26■■□□□ 1.31
CDHR1Q96JP9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.26■■□□□ 1.31
CDHR1Q96JP9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms