Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 AC116562.4-201ENST00000641316 2276 ntBASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 KRT16P3-201ENST00000439127 1283 ntBASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 UNC93B8-201ENST00000511903 705 ntBASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP6Q96FZ7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP6Q96FZ7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP6Q96FZ7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHMP6Q96FZ7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHMP6Q96FZ7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHMP6Q96FZ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 MIR6724-1-201ENST00000616420 92 ntBASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 MIR6724-2-201ENST00000616483 92 ntBASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 MIR6724-4-201ENST00000617390 92 ntBASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 MIR6724-3-201ENST00000622482 92 ntBASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms