Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTP4A1Q93096 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTP4A1Q93096 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTP4A1Q93096 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTP4A1Q93096 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.6■□□□□ 0.57
PTP4A1Q93096 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 MIR572-201ENST00000384983 95 ntBASIC18.59■□□□□ 0.57
PTP4A1Q93096 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.59■□□□□ 0.57
PTP4A1Q93096 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTP4A1Q93096 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTP4A1Q93096 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.58■□□□□ 0.57
PTP4A1Q93096 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PTP4A1Q93096 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.58■□□□□ 0.57
PTP4A1Q93096 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTP4A1Q93096 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.58■□□□□ 0.57
PTP4A1Q93096 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTP4A1Q93096 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTP4A1Q93096 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.58■□□□□ 0.57
PTP4A1Q93096 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTP4A1Q93096 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PTP4A1Q93096 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.58■□□□□ 0.56
PTP4A1Q93096 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.58■□□□□ 0.56
PTP4A1Q93096 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.58■□□□□ 0.56
PTP4A1Q93096 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.58■□□□□ 0.56
PTP4A1Q93096 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTP4A1Q93096 PCDHAC2-203ENST00000615316 3011 ntBASIC18.58■□□□□ 0.56
PTP4A1Q93096 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTP4A1Q93096 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTP4A1Q93096 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTP4A1Q93096 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTP4A1Q93096 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTP4A1Q93096 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.57■□□□□ 0.56
PTP4A1Q93096 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.57■□□□□ 0.56
PTP4A1Q93096 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTP4A1Q93096 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 FP700111.2-201ENST00000619190 1892 ntBASIC18.56■□□□□ 0.56
PTP4A1Q93096 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.56■□□□□ 0.56
PTP4A1Q93096 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.56■□□□□ 0.56
PTP4A1Q93096 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.56■□□□□ 0.56
PTP4A1Q93096 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
PTP4A1Q93096 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTP4A1Q93096 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms