Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMARCC1Q92922 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SMARCC1Q92922 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.72■■□□□ 1.87
SMARCC1Q92922 AC133681.1-201ENST00000465482 601 ntBASIC26.72■■□□□ 1.87
SMARCC1Q92922 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.72■■□□□ 1.87
SMARCC1Q92922 C2orf69P4-201ENST00000565394 541 ntBASIC26.72■■□□□ 1.87
SMARCC1Q92922 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.72■■□□□ 1.87
SMARCC1Q92922 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.72■■□□□ 1.87
SMARCC1Q92922 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMARCC1Q92922 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.72■■□□□ 1.87
SMARCC1Q92922 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.71■■□□□ 1.87
SMARCC1Q92922 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.71■■□□□ 1.87
SMARCC1Q92922 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
SMARCC1Q92922 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
SMARCC1Q92922 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC1Q92922 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMARCC1Q92922 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SMARCC1Q92922 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMARCC1Q92922 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.7■■□□□ 1.87
SMARCC1Q92922 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMARCC1Q92922 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
SMARCC1Q92922 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.7■■□□□ 1.87
SMARCC1Q92922 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC1Q92922 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC1Q92922 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.7■■□□□ 1.86
SMARCC1Q92922 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
SMARCC1Q92922 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SMARCC1Q92922 AC010331.1-201ENST00000611423 582 ntBASIC26.7■■□□□ 1.86
SMARCC1Q92922 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC1Q92922 AC026471.6-201ENST00000622954 1905 ntBASIC26.7■■□□□ 1.86
SMARCC1Q92922 AC068473.5-201ENST00000616428 2072 ntBASIC26.7■■□□□ 1.86
SMARCC1Q92922 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC1Q92922 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SMARCC1Q92922 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC1Q92922 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
SMARCC1Q92922 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SMARCC1Q92922 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC1Q92922 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC1Q92922 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC1Q92922 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.69■■□□□ 1.86
SMARCC1Q92922 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 AP001412.1-201ENST00000608405 714 ntBASIC26.69■■□□□ 1.86
SMARCC1Q92922 AC124016.1-201ENST00000609552 612 ntBASIC26.69■■□□□ 1.86
SMARCC1Q92922 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC1Q92922 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.69■■□□□ 1.86
SMARCC1Q92922 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 TSPY7P-201ENST00000431358 1114 ntBASIC26.68■■□□□ 1.86
SMARCC1Q92922 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC1Q92922 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC1Q92922 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC1Q92922 AC010542.4-201ENST00000563151 1910 ntBASIC26.67■■□□□ 1.86
SMARCC1Q92922 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC1Q92922 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC1Q92922 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC1Q92922 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC1Q92922 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC1Q92922 AL049637.2-201ENST00000641778 930 ntBASIC26.67■■□□□ 1.86
SMARCC1Q92922 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
SMARCC1Q92922 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC1Q92922 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC1Q92922 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms