Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 AC018445.3-201ENST00000624177 1945 ntBASIC14.04□□□□□ -0.16
COPS9Q8WXC6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 SMG8-203ENST00000578922 2178 ntBASIC14.04□□□□□ -0.16
COPS9Q8WXC6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS9Q8WXC6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.03□□□□□ -0.16
COPS9Q8WXC6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COPS9Q8WXC6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS9Q8WXC6 OR7E47P-201ENST00000546390 1422 ntBASIC14.02□□□□□ -0.16
COPS9Q8WXC6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS9Q8WXC6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COPS9Q8WXC6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.01□□□□□ -0.17
COPS9Q8WXC6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COPS9Q8WXC6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.01□□□□□ -0.17
COPS9Q8WXC6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COPS9Q8WXC6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms