Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 FAM21FP-204ENST00000608637 956 ntBASIC21.09■□□□□ 0.97
CHD5Q8TDI0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 MIR2861-201ENST00000636310 90 ntBASIC21.09■□□□□ 0.97
CHD5Q8TDI0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD5Q8TDI0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.08■□□□□ 0.97
CHD5Q8TDI0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 AC010980.2-201ENST00000587099 1412 ntBASIC21.08■□□□□ 0.97
CHD5Q8TDI0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 MKRN4P-201ENST00000444706 1521 ntBASIC21.08■□□□□ 0.97
CHD5Q8TDI0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD5Q8TDI0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD5Q8TDI0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.07■□□□□ 0.96
CHD5Q8TDI0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 AC142086.2-201ENST00000569753 217 ntBASIC21.06■□□□□ 0.96
CHD5Q8TDI0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 AC069236.1-201ENST00000604339 616 ntBASIC21.06■□□□□ 0.96
CHD5Q8TDI0 AL356652.1-201ENST00000615962 565 ntBASIC21.06■□□□□ 0.96
CHD5Q8TDI0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 RARRES2P4-201ENST00000514074 484 ntBASIC21.06■□□□□ 0.96
CHD5Q8TDI0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CHD5Q8TDI0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 CDV3P1-201ENST00000471403 739 ntBASIC21.05■□□□□ 0.96
CHD5Q8TDI0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 GPX1P1-201ENST00000388829 606 ntBASIC21.05■□□□□ 0.96
CHD5Q8TDI0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD5Q8TDI0 AC100791.3-201ENST00000617619 330 ntBASIC21.05■□□□□ 0.96
CHD5Q8TDI0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms