Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 AC005521.1-201ENST00000393351 872 ntBASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 AP003071.4-201ENST00000562276 1284 ntBASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 MCRIP2P1-201ENST00000394346 511 ntBASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 AC007322.3-201ENST00000426526 701 ntBASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 AC087633.2-202ENST00000565166 1439 ntBASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.15□□□□□ -0.14
ALMS1Q8TCU4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ALMS1Q8TCU4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.15□□□□□ -0.15
ALMS1Q8TCU4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 KRT18P68-201ENST00000392293 1000 ntBASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 CDV3P1-201ENST00000471403 739 ntBASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALMS1Q8TCU4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ALMS1Q8TCU4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms