Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLL1Q8TB92 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 SLC7A5P1-201ENST00000568957 537 ntBASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLL1Q8TB92 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 AC006015.1-201ENST00000429970 570 ntBASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 AC022517.1-201ENST00000592429 346 ntBASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCLL1Q8TB92 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 KRT18P11-201ENST00000435214 1283 ntBASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 KRT16P2-201ENST00000414673 1423 ntBASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGCLL1Q8TB92 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGCLL1Q8TB92 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 AL121603.2-201ENST00000557373 2117 ntBASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
HMGCLL1Q8TB92 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 AC137761.2-201ENST00000561729 223 ntBASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 AC145350.3-201ENST00000569033 163 ntBASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 AC120498.10-201ENST00000621827 505 ntBASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMGCLL1Q8TB92 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGCLL1Q8TB92 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLL1Q8TB92 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLL1Q8TB92 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLL1Q8TB92 AC061975.6-201ENST00000579045 1553 ntBASIC20.31■□□□□ 0.84
HMGCLL1Q8TB92 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms