Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 KRT18P68-201ENST00000392293 1000 ntBASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 FAM197Y4-202ENST00000622692 608 ntBASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 GUSBP5-202ENST00000510805 1989 ntBASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPOQ8N3V7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 RN7SL471P-201ENST00000580476 299 ntBASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPOQ8N3V7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 AC092368.3-202ENST00000574180 1591 ntBASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 AC092053.2-201ENST00000640557 1818 ntBASIC21.11■□□□□ 0.97
SYNPOQ8N3V7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 C1QBPP2-201ENST00000528754 825 ntBASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 MIR4497-201ENST00000583208 89 ntBASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNPOQ8N3V7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 CLDN5-201ENST00000403084 2357 ntBASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPOQ8N3V7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms