Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
C9orf40Q8IXQ3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
C9orf40Q8IXQ3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 NCF1B-203ENST00000435988 1254 ntBASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 CDV3P1-201ENST00000471403 739 ntBASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
C9orf40Q8IXQ3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 AC116050.2-201ENST00000612102 1779 ntBASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 AC007322.3-201ENST00000426526 701 ntBASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 RARRES2P4-201ENST00000514074 484 ntBASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 AC133552.2-202ENST00000575694 574 ntBASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 AC069236.1-201ENST00000604339 616 ntBASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 FAM21FP-204ENST00000608637 956 ntBASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf40Q8IXQ3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 AC005229.4-201ENST00000610085 2198 ntBASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 AL121832.2-201ENST00000610979 668 ntBASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 AC008694.1-202ENST00000636953 945 ntBASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 CLDN5-201ENST00000403084 2357 ntBASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.15■□□□□ 0.66
C9orf40Q8IXQ3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 AC093787.1-201ENST00000450396 207 ntBASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms