Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.44■□□□□ 0.86
APLFQ8IW19 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.43■□□□□ 0.86
APLFQ8IW19 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.43■□□□□ 0.86
APLFQ8IW19 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 AC016769.1-201ENST00000409132 1010 ntBASIC20.43■□□□□ 0.86
APLFQ8IW19 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.43■□□□□ 0.86
APLFQ8IW19 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
APLFQ8IW19 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.43■□□□□ 0.86
APLFQ8IW19 KRT18P61-201ENST00000585825 1298 ntBASIC20.43■□□□□ 0.86
APLFQ8IW19 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
APLFQ8IW19 AC068587.7-201ENST00000641602 218 ntBASIC20.43■□□□□ 0.86
APLFQ8IW19 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.43■□□□□ 0.86
APLFQ8IW19 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APLFQ8IW19 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.43■□□□□ 0.86
APLFQ8IW19 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.42■□□□□ 0.86
APLFQ8IW19 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
APLFQ8IW19 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 AC137761.2-201ENST00000561729 223 ntBASIC20.42■□□□□ 0.86
APLFQ8IW19 AC145350.3-201ENST00000569033 163 ntBASIC20.42■□□□□ 0.86
APLFQ8IW19 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.42■□□□□ 0.86
APLFQ8IW19 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
APLFQ8IW19 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
APLFQ8IW19 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APLFQ8IW19 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
APLFQ8IW19 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APLFQ8IW19 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.41■□□□□ 0.86
APLFQ8IW19 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APLFQ8IW19 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.41■□□□□ 0.86
APLFQ8IW19 RAP2CP1-201ENST00000605103 478 ntBASIC20.41■□□□□ 0.86
APLFQ8IW19 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.41■□□□□ 0.86
APLFQ8IW19 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APLFQ8IW19 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APLFQ8IW19 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
APLFQ8IW19 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APLFQ8IW19 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APLFQ8IW19 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.4■□□□□ 0.86
APLFQ8IW19 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
APLFQ8IW19 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.4■□□□□ 0.86
APLFQ8IW19 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.4■□□□□ 0.86
APLFQ8IW19 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.4■□□□□ 0.86
APLFQ8IW19 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APLFQ8IW19 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
APLFQ8IW19 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
APLFQ8IW19 LETM1P2-201ENST00000597330 2178 ntBASIC20.39■□□□□ 0.86
APLFQ8IW19 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
APLFQ8IW19 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APLFQ8IW19 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
APLFQ8IW19 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.39■□□□□ 0.85
APLFQ8IW19 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.39■□□□□ 0.85
APLFQ8IW19 BX005040.4-201ENST00000637145 1518 ntBASIC20.39■□□□□ 0.85
APLFQ8IW19 AP004607.4-201ENST00000530158 1459 ntBASIC20.39■□□□□ 0.85
APLFQ8IW19 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.39■□□□□ 0.85
APLFQ8IW19 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APLFQ8IW19 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APLFQ8IW19 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.39■□□□□ 0.85
APLFQ8IW19 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APLFQ8IW19 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms