Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 AC008175.2-201ENST00000612840 297 ntBASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 AC092667.1-201ENST00000434301 2586 ntBASIC18.31■□□□□ 0.52
LINC00346Q8IVM7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 LINC02228-203ENST00000641970 1355 ntBASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC00346Q8IVM7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 LINC01521-201ENST00000504184 1943 ntBASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00346Q8IVM7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 ZNRF2P3-201ENST00000424200 374 ntBASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00346Q8IVM7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 POU5F1P4-201ENST00000413175 1085 ntBASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00346Q8IVM7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms